SubtiBank SubtiBank
Version comparison:

2020-05-07 10:39:512025-05-10 18:48:22

The protein

Structure

[PDB|5IQR] (from E. coli, bound to the [SW|ribosome], 38.8% identity)

[PDB|1VJ7] (N-terminal catalytic fragment, from ''Streptococcus equisimilis'', 60% identity) [Pubmed|15066282]

[PDB|6YXA] (aa 1 ... 556) [pubmed|32937119]

[PDB|6HTQ] (the [[protein|RelA]]-[SW|ribosome] complex) [pubmed|32937119]

[PDB|1VJ7] (N-terminal catalytic fragment, from ''Streptococcus equisimilis'', 60% identity) [Pubmed|15066282]

Biological materials

Mutant

''[[gene|relA]]'' mutant [Pubmed|9383190] - note that ''[[gene|relA]]'' mutants are prone to suppressor mutations in the ''[[gene|sasA]]'' or ''[[gene|sasB]]'' loci [Pubmed|18670626]

GP2066 (''[[gene|sasA]] [[gene|sasB]] [[gene|relA]]::mls''), available in [SW|Jörg Stülke]'s lab

BKE27600 (Δ[[gene|relA]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE27600 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGGAATCACCTTTTTTAA, downstream forward: _UP4_TAAAGGGGTTAGAAAAGAGA

BKK27600 (Δ[[gene|relA]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK27600 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGGAATCACCTTTTTTAA, downstream forward: _UP4_TAAAGGGGTTAGAAAAGAGA

GP3429 ''relA-6xHis-cat'', available in Jörg Stülke's lab

''[[gene|relA]]'' mutant [Pubmed|9383190] - note that ''[[gene|relA]]'' mutants are prone to suppressor mutations in the ''[[gene|sasA]]'' or ''[[gene|sasB]]'' loci [Pubmed|18670626]

GP2066 (''[[gene|sasA]] [[gene|sasB]] [[gene|relA]]::mls''), available in [SW|Jörg Stülke]'s lab

BKE27600 (Δ[[gene|relA]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE27600 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGGAATCACCTTTTTTAA, downstream forward: _UP4_TAAAGGGGTTAGAAAAGAGA

BKK27600 (Δ[[gene|relA]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK27600 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGGAATCACCTTTTTTAA, downstream forward: _UP4_TAAAGGGGTTAGAAAAGAGA

labs

[SW|Mohamed Marahiel], Marburg University, Germany [http://www.uni-marburg.de/fb15/fachgebiete/bio/marahiel?language_sync=1 homepage]

Jue D Wang, University of Wisconsin–Madison [https://www.researchgate.net/profile/Jue_Wang8 ResearchGate-Profile]

[SW|Mohamed Marahiel], Marburg University, Germany [http://www.uni-marburg.de/fb15/fachgebiete/bio/marahiel?language_sync=1 homepage]

[SW|Jade Wang], University of Wisconsin–Madison [https://bact.wisc.edu/people_profile.php?t=rf&p=jdwang2 homepage]

References

Original publications

25331430, 9383190, 10209741, 24489751, 19447912, 13129942, 12372825, 12081964, 11948165, 12419222, 23028324, 24163341, 24682323, 25899641, 15066282, 27775002, 27875634, 31003868, 15066282, 32176689, 32184768, 31003868

25331430, 9383190, 10209741, 24489751, 19447912, 13129942, 12372825, 12081964, 11948165, 12419222, 23028324, 24163341, 24682323, 25899641, 15066282, 27775002, 27875634, 31003868, 15066282, 32176689, 32184768, 31003868, 32393900, 32937119